>Mh10g200708_Contig1548_16997..18411_M_hapla.pep_
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---------------MTFEV
LKKSLGKGTFGKVILCREKR
TSRLYAIKILKKEVIIQKDE
VAHTLTENRVLQR---CKHP
FLTELTYSFQT---------
--------------------
--------------------
---------------TDRLC
FVMEFAIGGDLYYHLNRQVG
KYKEGFSESRTRFYGAEIVL
ALGYLH-DNNIVYRDLKLEN
LLLDRDGHIKIADFGLCKED
ISFSGRTRTFCGTPEYLAPE
VLEENDYGRSVDWWGVGVVM
YEMMCGRLPFYSKEHEKLFE
MILQCSLRFPSRLSPEAKVL
LSGLLVKDPNKRLGG-GPDD
YREIQATAFFKPIDWEKLYR
KEIEPPFKPQLSSESDTSYF
DSEFTREAVQLTPPAVR-NG
PLDTLDEMDEIQNNFVQFSF
HHGELGSSLRENSEIMEE--
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>Minc16984_MiV1A1.short_header.longest_isoform_
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----------MSTASQKVR-
-------TREDVIYEGWLLK
--------------------
--------------------
--------------------
--------------------
--RGEHIKNWRQRYFVLFKD
GSLLGYKS------KPIDSY
NDPLN---------------
DFTVKDVQLMKLDRPKPNTI
LVRGLQ--------------
--------WTTVIERMFCAE
TP------------------
--------DQRDCWINAIKS
VAENLKR-------------
--------------------
--------------------
--------------------
----------EELLHGGVQ-
DQEMMD--------------
--------------------
-----------------VSQ
LPQAMDP-------------
--------------------
-------------TQYPWTY
QPTPPIFDPQ----------
--------------------
--------------------
--QHQQFENGYMPGLQGFGG
IPNQFHTTVAAAGAAQQK--
--------------------
--------------------
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----------------QLLH
EAMVKAQAAANAAAMATSS-
--------------------
--------------------
--------------------
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--------------------
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--------------------
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--------------------
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------------------GG
NVCAEAVAAAEKAAAELKKP
E-------------------
------GQKTRSRITLDDFE
FLKVLGKGTFGKVILCREKR
TSRLYAIKILKKEVIIQKDE
VAHTLTENRVLQR---CKHP
FLTELTYSFQT---------
--------------------
--------------------
---------------SDRLC
FVMEFAIGGDLYYHLNRQVG
KYKEGFSESRTRFYGAEIVL
ALGYLH-DNNIVYRDLKLEN
LLLDRDGHIKIADFGLCKED
ISFSGRTRTFCGTPEYLAPE
VLEENDYGRSVDWWGVGVVM
YEMMCGRLPFYSKEHEKLFE
MILQCSLRFPSRLSPEAKVL
LSGLLVKDPNKRLGG-GPDD
YREIQATAFFKPIDWEKLYR
KEIEPPFKPQLSSESDTSYF
DSEFTREAVQLTPPAVR-NG
PLDTLDEMDEIQNNFVQFSF
HHGELGSSLRENSEIMEE--
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>Minc09327_MiV1A1.short_header.longest_isoform_
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--------------MNTGNG
DGGGFFAPAPAMVSASPTAP
IPQQQSKPSITGQQEAPAG-
--------------------
------QGQRTRKASSTSN-
--------FLASLASSIYGS
STPSGGTGSSHTQSFSIQGD
IDATQQRNSPLPSLSSIGSD
ATLNRKMSTASQKVRTREDV
IYEG--------------WL
LKRGEHIKNWRQRYFV---N
GSLLGYKS------KPIDSY
NDPLN---------------
DFTVKDVQLMKLDRPKPNTI
LVRGLQ--------------
--------WTTVIERMFCAE
TP------------------
--------DQRDCWINAIKS
VAENLKR-------------
--------------------
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--------------------
----------EELLHGGVQ-
DQDMMD--------------
--------------------
-----------------VSQ
LPQAMDP-------------
--------------------
-------------TQYPWTY
QPTPPIFDPQ----------
--------------------
--------------------
--QHQQFENGYMPGLQGFGG
IPNQFHTTVAAAGAAQQK--
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----------------QLLH
EAMVKAQAAANAAAMATSS-
--------------------
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------------------GG
NVCAEAVAAAEKAAAELKKP
E-------------------
------GQKTRSRITLDDFE
FLKVLGKGTFGKVILCREKR
TSRLYAIKILKKEVIIQKDE
VAHTLTENRVLQR---CKHP
FLTELTYSFQT---------
--------------------
--------------------
---------------SDRLC
FVMEFAIGGDLYYHLNRQVG
KYKEGFSESRTRFYGAEIVL
ALGYLH-------DNNILEN
LLLDRDGHIKIADFGLCKED
ISFSGRTRTFCGTPEYLAPE
VLEENDYGRSVDWWGVGVVM
YEMMCGRLPFYSKEHEKLFE
MILQCSLRFPSRLSPEAKVL
LSGLLVKDPNKRLGG-GPDD
YREIQATAFFKPIDWEKLYR
KEIEPPFKPQLSSESDTSYF
DSEFTREAVQLTPPAVR-NG
PLDTLDEMDEIQNNFVQFSF
HHGELGSSLRENSEIMEE--
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>C12D8.10b_wormpep204.longest_isoform.pep_
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--------MSMTSLSTKSR-
-------RQEDVVIEGWLHK
--------------------
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--KGEHIRNWRPRYFMIFND
GALLGFRA----KPKEGQPF
PEPLN---------------
DFMIKDAATMLFEKPRPNMF
MVRCLQ--------------
--------WTTVIERTFYAE
SA------------------
--------EVRQRWIHAIES
ISKKYKG-------------
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---------------TNANP
QE------------------
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------------------EL
METNQQP-------------
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--------------KIDEDS
EFAGAAHAIMGQPSSGHG--
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DNCSIDFRASMISIADTSEA
A-------------------
---------KRDKITMEDFD
FLKVLGKGTFGKVILCKEKR
TQKLYAIKILKKDVIIAREE
VAHTLTENRVLQR---CKHP
FLTELKYSFQT---------
--------------------
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---------------NDRLC
FVMEFAIGGDLYYHLNREVQ
MNKEGFSEPRARFYGSEIVL
ALGYLH-ANSIVYRDLKLEN
LLLDKDGHIKIADFGLCKEE
ISFGDKTSTFCGTPEYLAPE
VLDDHDYGRCVDWWGVGVVM
YEMMCGRLPFYSKDHNKLFE
LIMAGDLRFPSKLSQEARTL
LTGLLVKDPTQRLGG-GPED
ALEICRADFFRTVDWEATYR
KEIEPPYKPNVQSETDTSYF
DNEFTSQPVQLTPPSRS--G
ALATVDEQEEMQSNFTQFSF
HNVMGSINRIHEASEDNEDY
DMG-----------------
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>14992.m11148_BMA1.short_headers.longest_isoform.pep_
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-----MSTENISIKSQKLG-
----------EAVHEGWLMK
--------------------
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--RGEHIKNWRPRYFVLFKD
GALLGFRA----KPDPDQPL
PDPLN---------------
DFTVKNVQLMKVERPKPNTF
LVRGLQ--------------
--------WTTVIERMFNAE
SA------------------
--------EIREGWINAIKV
VSDSLKE-------------
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------------------SE
SEMDT---------------
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-------------EIMEESS
ILSEVNRQITTT--------
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-------------------H
EQLKMSVNSGGRDMMSMADA
A-------------------
------EAARRDKISLEDFE
FLKVLGKGTFGKVILCKEQR
TRKLYAIKILKKEVIIQKDE
VAHTLTENRVLQR---CKHP
FLTQLKYSFQTPFHLCFVME
FANGGELFFHLQQNRIFSET
RTQFYGAEIILALGYLHEQC
IVYRDMKELRYSFQTSDRLC
FVMEFAIGGDLYYHLNKEVQ
LKRAGFSESRTCFYGAEIVS
AVGYLH-ANNIIYRDLKLEN
LLLDKDGHIKIADFGLCKED
ISFGDRTRTFCGTPEYLAPE
VLEDNDYGRAVDWWGVGVVM
YEMMCGRLPFYSKDHEKLFE
LILTGAIRFPSKLTAPARAL
LTGLLVKDPNQRLGG-GPED
AQEIMQHEFFNNIDWEKLYR
KEITPPFRPNVQSDTDTCYF
DKEFTQAPVQLTPPSVR-SG
PLDTVDEMDEMQNNFVQFSF
HNAVSSPLRNVNDTMDALE-
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>F28H6.1a_wormpep204.longest_isoform.pep_
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----------MSTENAHLQ-
--------KEDIVIESWLHK
--------------------
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--KGEHIRNWRPRYFILFRD
GTLLGFRS----KPKEDQPL
PEPLN---------------
NFMIRDAATVCLDKPRPNMF
IVRCLQ--------------
--------WTTVIERTFYAD
SA------------------
--------DFRQMWIEAIQA
VSSHN---------------
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-------------------R
LKENAGN-------------
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------------TSMQEEDT
NGNPSGESDVNMDATSTR--
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--SDNDFESTVMNIDEPEEV
P-------------------
---------RKNTVTMDDFD
FLKVLGQGTFGKVILCREKS
SDKLYAIKIIRKEMVVDRSE
VAHTLTENRVLYA---CVHP
FLTLLKYSFQA---------
--------------------
--------------------
---------------QYHIC
FVMEFANGGELFTHLQRCK-
----TFSEARTRFYGSEIIL
ALGYLH-HRNIVYRDMKLEN
LLLDRDGHIKITDFGLCKEE
IKYGDKTSTFCGTPEYLAPE
VIEDIDYDRSVDWWGVGVVM
YEMMCGRLPFSAKENGKLFE
LITTCDLKFPNRLSPEAVTL
LSGLLERVPAKRLGA-GPDD
AREVSRAEFFKDVDWEATLR
KEVEPPFKPNVMSETDTSFF
DREFTSMPVQLTPPRRG--E
ELPTVDEEEELQANFIQFAS
YYVSGSLERSYDTNRSADKY
EIR-----------------
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>TS_TRISPI_Contig1.a.SNAP.55_T_spiralis.071204.pep_
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------------MYTHIYKS
VASTVAYKHNGQLAKVLAAC
VSVTLRIIMVIEKFVFSLAV
LPTYYACILC----------
------QSSFINSIFTSNVN
RFVILRRYGICYKVKVSSKT
VQETVDTQAVNDEHFEFTLR
PLWEIKFSIRISSRSFLQRL
VSSTILSAGMRPPVDSKIVH
EGWLMKRAETSQTCENFAFH
LCLGEHIKNWRSRYFILFDD
GTLLGFRQ-----RPENGSY
NDPLN---------------
DFTVKDCQLMKVDRPRPNTF
IVRGLQ--------------
--------WTTVIERTFNAL
SP------------------
--------EDRENWVNAIES
VSQSLKQ-------------
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-------------LKNDAGE
PMQQSDQNIFSE--------
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----SGLPTQLEQLMKIADP
S-------------------
----------PRKVSLDDFI
LLKVLGKGTFGRVILAREKQ
TDQLFAIKILKKEVIIAKDE
VAHTLTENRVLQK---TKHP
FLT---YSFQT---------
--------------------
--------------------
---------------SDRLC
FVMEYACGGELFFHLQREK-
----LFTEERTRFYGAEIVS
ALAYLH-ENNIVYRDIKLEN
LLLDREGHIKIADFGLCKED
ISFGEKTKTFCGTPEYLAPE
VLEDNDYGRGVDWWGTGVVM
YEMMCGRLPFYNKDHEKLFE
MILTETVKFPGKLSQEAKSL
LSGLLMKDPNRRLGG-GPED
AQEIMAHPFFEPIDWQALYE
KRLVPPFRPEVQSDTDTSYF
DQEFTRESVDFTPPAQFG--
TLSSISEI-DEQPYFTQFSF
HGNSAQRQSFHQFDDI----
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>Smp_073930.2_Smansoni.v4h.longest_isoform.pep_
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---------------MEILC
NYSQNPVVGSSKSSHTEHEP
VSVSAKVQDTTASQRRNIN-
--------------------
-------CTSSNIFSSLQN-
-------AHLPVVPNPNVLF
KNELTENYSDNLTPRISPYL
LGMLQCRPVSLPLTRNVVKE
GWLMK---------------
--------------------
--RGEHIKNWRRRYFKLRED
GTFYGYKIQ------PKDDM
AQPLN---------------
NFTVRDCQIICLNKPKPYTF
LIRGLQ--------------
--------WTNVVERLFFVE
TE------------------
--------AERNYWLSAIQS
VANRLKS-------------
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-------------SFEQPVS
VHN-----------------
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------LNLAENMIVDIPQR
P-------------------
----------VKRYSVNDFR
LLKVLGKGTFGKVILCQENE
TGHFYAMKILKKSVLIEKEE
VVHTMTENRVLQQ---CKHP
FMTELRYSFTT---------
--------------------
--------------------
---------------PNYLC
FVMEYVNGGELFFHLQRDR-
----VFSEERAKFYGAEITL
ALGYLH-HQNVVYRDLKLEN
LLLDKDGHIKIADFGLCKED
MYYGASTKTFCGTPEYLAPE
VLLDNDYGRSVDWWGLGVVM
YEMMCGRLPFYSSDHEVLFE
LILQENVSFPARLSHPAQDI
LSRLLIKDPTSRLGG-GIQD
VLEVMAHLFFASVDWDRLIR
KDIQPPWKPDVVDEKDTKYV
PDEFKDTSVDLTPPNDNEDN
MNRIVDG-----PYFEQFSF
HGSRQSLNSRIIVHSDSKGI
PSNCANQMGFVLKFPVRFLT
SLGGSLKASSLKVAVSTKHL
VASPTFSQFNYIIHRQFSDT
PSDNSVNNVSDLVKGSRIVL
FMKGNPNEPRCGFSNAVCRI
LEMHGILEKASKGDDPELFA
SYDVLENEELRAAAKVFADW
PTFPQLYFDGEFIGGCDILL
DMHRSGKLTEELERLGIGSA
LAKVSDKEKT
>Sjc_0112070_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MEILHNYS
QNPVVGSSESNERSCTEHES
VSLSAEGQDTSASQRRNAD-
--------------------
-------CIRLNIFSDFKS-
-------SHLSMVTNRNVVF
GNEQIGNYPDILESRISPYL
LGMLQCRQVSLPLTQKVVKE
GWLMK---------------
--------------------
--RGEHIKNWRRRYFKLRED
GAFYGYKIQ------PKDNV
TQPLN---------------
NFTVRDCQIIRLNKPKPYTF
LIRGLQ--------------
--------WTNVVERLFFVE
TE------------------
--------AERNCWLSAIQS
VANRLKS-------------
--------------------
--------------------
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-------------SCEKPVS
VHN-----------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
------LDLSENMIVDIPQR
P-------------------
----------VKRYSVDDFR
LLKVLGKGTFGKVILCQENE
TGHFYAMKILKKSVLIEKEE
VVHTMTENRVLQQ---CKHP
FMTELRYSFTT---------
--------------------
--------------------
---------------PNYLC
FVMEYVNGGELFFHLQRDR-
----VFSEERAKFYGAEITL
ALGYLH--------------
--------------------
----NQNVVYRYGEKFCFKI
ILYPINWISFYDWVVCGSLS
LNLIS---------------
--------------------
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----------
