>Sjc_0134940_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------MSAKAASKVVKQ
LAGSGTGQSLMDRVTQAKYS
LAGSGLGKVVAKATTEEIGA
PKKKH---------------
--------------------
-------IDYLVNCSNEPNV
SIPLLAGLLVERTQEKSWVI
VFKALITTHNLMNFGN-EKF
SHYLASNNCPVDLPHFNDKT
SS------------------
-----QSYEMSIFIRKYSKY
LSEKIASYRAMAFDFCKVKR
G-------------VLSTDP
KLLS-----LSFSMALNS--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----
>Smp_162260_Smansoni.v4h.longest_isoform.pep_
--------------------
--------MSAKAASKVVKQ
LAGSGTGQSLMDRVTQAKYS
LAGSGLGKVVAKATTEEIGA
PKKKH---------------
--------------------
-------LDYLVNCSNEPNV
SIPLLAGLLVERTQEKSWVI
VFKALITTHNLMNFGN-EKF
SHYLASNNCPIDLPHFNDKT
SS------------------
-----QSYEMSIFIRKYSKY
LSEKIASYRAMAFDFCKVKR
GRDDGVLRTMPVDKLLKALP
VMQSQILTLLEFDALEKDLN
NAIINAAFLLLYKDLIRLFA
SYNEGMINLIEKYFTLKRRQ
CRLGLDLYHAFPGLLSKLTE
FLTLAESLGIGDKDSLGLQP
VPEKVIQAMEQHLQILESKK
GSDDEDEETHTSTKP-NVP-
---------------KKPTL
PVPIPSQTVVCTDANKISSH
NPPTQNTDYN----------
--------------------
--------------------
------------DDAESINK
THDSN---------------
--------------------
--------------------
--ILGQSEQLNDDTTEPTVA
SYPTVVLNDEDGLPSALQEE
IIATAKGHLNETLVKSSEAV
KRSTQQGAVKAPVHTQLGRS
E-------------------
--------------------
------------------QR
TVSVPPTRSRSPSPAR----
--------------------
-------------PPPSPSR
QYGKTTPKQPSISASDSEAI
NDDNTDGINKTKHNSSSLGL
NVEVNAQTDASSICASPFAG
DEEPVEPVTDTDTNVWSNKS
------------SEAHVEQV
HGSNQHSAIDDLLG------
--------------------
---LDLLSTDDSIPQTNIEP
IPFSAQTESVGKEGESNPSA
VNN-----------------
-------TATTTNTTGSASV
FDDLLSLD--PLLEKDSVGG
TTTTTTTATTTTTKIPVNNP
PTSFNN------------SL
PPGLKPVPATVPIRPAVVMS
ASQNKNPLDALDSTLSNLAS
SLGGQQTWGSTNLKKKPLAE
SEKPT---------------
--------------------
--------------------
--------------------
----
>Minc16518_MiV1A1.short_header.longest_isoform_
--------------------
---------MQTLEKIAHAQ
MPFTSGGQTITDRFNAAKHS
LAGSQLGKTICKATTEELMA
PKKKH---------------
--------------------
-------LDYLLHCTNEPNV
SIPSMANLLIERTQNPNWIV
VYKALITIQNLMCYGN-ERF
SQYLASCNTTFNLTNFMDKS
SLG-----------------
SDAIAAGYDMATHVRRYGKY
ISEKIHTYRLCAFDFCKVKR
GRDDGLLRTLYTDKLLKTIP
ILQSQIDALLEFQVTSSELN
NSVINCSFILLFRDLIRLFA
CYNDGIINLLEKYFDMNKKQ
CKEALDLYKAFLNRLDKVQA
FLTIAESAGIERGEVPDLTR
APASLLEALEAHLFHLGGGR
GAQQPALSQSSAQQP-PLVP
--------------------
PMMAPNPFGGQIYPGQQQQN
INN-----------------
--------------------
--------------------
-------------------M
TSTT----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------PYWTPQM
QQMGGGGMYPQFG-------
--------------------
--------------------
--------------------
----------------VNST
AGYTTTEQPSSIPQQ-----
--------------------
------QPPQRPPLPPQQPP
-----INNGIQKTEAETLSH
LVG-----------------
----------NFGIPSTTTT
SG------------------
--------------------
--------------------
--------------------
-------FAPSFTQANNSSN
PFGAPVTYPSTNPF------
--------------------
--------------------
--------------------
--------------------
----
>Mh10g200708_Contig656_4209..8759_M_hapla.pep_
--------------------
---------MQTLEKIAHAQ
MPFTSGGQTITDRLNAAKHS
LAGSQLGKTICKATTEELMA
PKKKH---------------
--------------------
-------LDYLLHCTNEPNV
SIPSMANLLIERTQNPNWIV
VYKALITIQNLMCYGN-ERF
SQYLASCNTTFNLTNFMDKS
TLG-----------------
SDAIAAGYDMATHVRRYGKY
ISEKIHTYRLCAFDFCKVKR
GRDDGLLRTLYTDKLLKTMP
ILQSQIDALLEFQVTSSELN
NSVINCSFILLFRDLIRLFA
CYNDGIINLLEKYFDMNKKQ
CKEALDLYKAFLARLDKVQS
FLSIAESAGIERGEVPDLTR
APASLLEALESHLFHLGGGR
GTQQPTLSQSSAQQM-VSQ-
--------------------
QICSAQQIYSNQYPSQYQDY
SVDESVKQR-----------
--------------------
--------------------
------------------YL
EEEKE---------------
--------------------
--------------------
------RLRQYEEQRRIQLQ
QQ------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------GVPTSSG
PLIETNNPFGGFP-------
--------------------
-------------STPLQQQ
FPIASDLLVFDTPPKGGEGG
-------------VLSRQQE
LDSTNPFAMVAELNN-----
--------------------
----RTQPAHSTPFNGCGAP
PPPIDNPFLNYQPQPPLIPP
MMAPN---------------
----------PFGQIYPGQQ
QNIMTSTPYWTPQMQMGGGG
GMYPQFGINSSSGYNTEPSS
IPPMSQ--------------
-QHQQQPPQRPPLP-PQQQP
NNGIQKNETETLSQLVGNFG
ISSATSTNNSGFAPSFTQAN
NSN-----------------
--------------------
-PFGG---------------
--------------------
----
>C32E8.10c_wormpep204.longest_isoform.pep_
--------------------
---------MQTIEKALHQP
MPFTTGGQTISDRLTAAKHS
LAGSQLGKTICKATTEEVMA
PKKKH---------------
--------------------
-------LDYLLHCTNEPNV
SIPSMANLLIERTQNPNWTV
VYKALITIHNIMCYGN-ERF
SQYLASCNTTFNLTAFVDKV
GG------------------
----AGGYDMSTHVRRYAKY
IGEKINTYRMCAFDFCKVKR
GREDGLLRTMHTDKLLKTIP
ILQNQIDALLEFSVTTSELN
NGVINCSFILLFRDLIRLFA
CYNDGIINVLEKYFDMNKKQ
CRDALDTYKSFLTRLDKVAE
FLRVAESVGIDRGEIPDLTR
APASLLEALEAHLIHLEGGK
APPPTQQHVAPHQFT-TGF-
--------------------
AFSQQPQPALGDAERQRYIE
LEQERLRQFE----------
-------------------D
QKKS----------------
------------INSANPFA
NDVAS---------------
--------------------
--------------------
----AAPAPATSAAQPDLLD
MFQSSAAPAPQTADVTNPFG
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------NFA
APS----------AFPTNVP
PPAAHSAPFGVQP-------
-----------APQHSAAPF
YANLHQAP-----PMQSQAP
NEPENPFITAPAAPQMHNAP
--------------PVPPPP
ASQGAPAPINPFADP-----
--------------------
----SATAASSAQPFGDPDD
FKFEQKNVKIKILIPGHQAA
PFG-----------------
---------------YPNAH
PDDLARMTAQMSLNQQGAPA
GWNTTTSAVSNNPFGATSAP
QPMYTAP------------M
GMYQQPFGAQPMWN--PAMA
AYGQQYGYGQPVPPQQQHQI
QLVHAAMAAKNAAQAQQAQA
ASA-----------------
--------------------
DPFGL---------------
--------------------
----
>14628.m00174_BMA1.short_headers.longest_isoform.pep_
--------------------
---------MQTIEKALHQP
MPFTTGGQTITDRLTAAKHS
LAGSQLGKTICKATTEELMA
PKRKH---------------
--------------------
-------LDYLLHCTQEPNV
SIPSMANLLIERTQNPNWTV
VYKALITIHNIMCYGN-ERF
SQYLASCNTTFNLGSFLDKN
SAQGHSPMDYTRSSTKHWAS
LDSVLVGYDMSQHVRRYGKY
ISEKIYTYRLCAFDFCKVKR
GREDGLLRTMNADKLLKTLP
ILQNQIDALLEFQVTSAELN
NGVINCSFILLFRDLIRLFA
CYNDGVINLLEKYFDMNKKQ
CRDALDAYKSFLLRLDKVAS
FLKVAESVGIDRAEIPDLTR
APASLLEALEAHLVYLEGGR
APPTVHHEQFNAAMA-QSAP
-------------LFSSAQT
GIIDDSAKQKYLEEEKERLR
LFEEQRKRQAVAAGSSGIDV
G----------GHSFNPFAA
AQSSGSNAGRSTKPSDDLLT
LFDPMPAGGGITAPSGYGAA
APVNATPQPMALDPTNPFAQ
NVFQQQSATVMSTNSAPGFA
GYPN----IGRTNAFGADFA
TAFNIGAVAPATTETNVGFN
PFLTNNIVDSSAPPVSRQWS
VSCEETDKQWSGKASQDAIP
PQHWSSAVSRSDLEGGSATA
P-------------------
-------------SWSKNGE
SSESDEAVGATGTDISNVPQ
QPSEMVNSALR---------
--------------------
-------------NPFGAMQ
QNAQALHTAGVSATVITPQQ
PDIPAFGAPPSGASSANVSP
VHFGMTTQAPPPPPPPPPPS
AVIPNQNLTIYEQTPFSRMD
G-------------SYNSSP
VIPRLLHQQATAPHPG----
--------------------
---AANLNAYGAQQLPPIPC
AATTQAGKFNSGDLDSALSS
LADN----------------
---------LSVSGKGTSNH
GKPIQWNNQGGVRPAGGAHA
MAQPQYAAIPPQQWP-----
--------------------
--PMGVYAPQPGIYAQQPMI
GMYAQPGYNPQMQQPAAPPV
YGIAPGQTPPQAGQAQQAAP
PPP-----------------
-------------------H
RPFM----------------
--------------------
----
>TS_TRISPI_Contig32.SNAP.69_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
---------MRRNVEYDFSM
RCISH---------------
--------------------
----------LLHCSHEPNV
SIPHLANLLLERTQNTNWCV
VFKALITIHNLMCYGN-ERF
LQYLASLNAAFNLANFLDKT
TV------------------
-----QGYDMSTHIRRYAKY
IGEKVNTYRLMAFDFCKVKR
GRDDGLLRTMPVDKLVKTLP
VLQGQIDTLLEFQVSPNDLT
NGVINSCFILMFRDLIRLFA
CYNDGIINLLEKYFEMPKKQ
CKEALELYKKFLTRMDRVAE
FLKVAENVGIDRGEIPDLAR
APSSLLDALEVHLASVNLAS
QLPAQNQRDPFSITTNTTTT
DSGVYPDLDAMNSLRVGARE
KTTLSEVPFSVMHAAAASTS
SFNPFADPEPTDRHQEELLM
WN--------TNPFADNYPP
VSATPPLQPQPAATQFIPNV
GWNVPQVQQQQQVGGAPFAT
NGHAPMNTMNFASEESFGRA
FASGGVVGGGSSGGVSQSTT
AGKANISAEEFVSSLATNPF
LSDTFASSNAACTQPPPPMP
PLPVVADPEPTWTPEFSNEG
VDQKSQHPSVPIHSTESAAE
IIAQLKQNAQALSSATRFKA
PQASPAGIAQQQQPQLPQQQ
QQQQQQQQQQQHHQEQQQQQ
RYQQQQHYSALQSGSVEAAR
VGAPVHASLPAPISALN---
-----------------LPK
KPS---------LDDGSDGE
PDSESSKIATATEVTTSTTH
GGVYLDTPFCKHFAFALTWM
QVTAVLIRLVSQASPVPPYG
HATGDWGGQQRIPTAYSAAV
G----------AQQPAAAVT
FDANIGEGHGPVEMLYNYWN
CCVIETVMCCACHRFG----
---SASGSDLMNFGSSKQPP
TAGTAANRLGGTDLDSTIAN
LAKN----------------
---------LSLDRNSQDTK
ANGARTGMMMQSAMYGQPTP
TMPPHPYMQPYPYMQFTAEK
TPIMMQG-------SMMNNM
PMQMYPVAPAMYQPYSNMRP
VGGTGIPAAQHIPPTLSGNA
EWASANRQHPPGLGDTSSAQ
QDP-----------------
-------------------F
GAM-----------------
--------------------
----
>Sjc_0024350_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
-----MEKDLNNAIINAAFL
LLYKDLIRLFASYNEGMINL
IEKYFS--------------
--------------------
----------LKRRQCRLGM
DLYHAFPGLLSKLTEFLTLA
ESLGIGDKDSLGLQPVPEKV
IQAMEQHLQILESKKGSDEE
GE------------------
---------DSSNARASTKP
GVPKKPTLVVPIPNQTANPT
EANKSATRTHTDDMSNVNWV
DKPNGSTNIEGVSEQLNDST
DSTS-SHPAVIVNDEDGLPS
ALQEEIIATARGHLNETLVK
STEAVKRSTQHGAVNIPVHT
QLGRSEHRTVSVPPTRSRSP
SPARPPPASPSHNVVTTPKQ
PSISVSDSEAIEDDNEEQLK
IN-----------RTKHNLS
LLGASSVCASPFAGDEEPVA
PVTDTTTSWS----------
-----------DKPPAHMEP
VHGTGVSSTKPSAIDDLLGL
DLLSTDPIPQTDIKPIPISV
HQIASTGDDNAKTSVVSIDT
TAASATSHVAGLKPVPSTVP
IRPAVVLSASQNKNPLDALD
STLSNLASSLGGQQAWGSTN
MKKKPLAESEKPTNNIAYWI
TTGYSHPLCAKYPAALNSRK
IIKLGVEVATADPLSNVTTN
D-------------------
--------------------
---------------SNYHY
IITKDKKLSNSMEYKN----
--------------------
--------------SISSWS
KERLEDQYLRLYDDYLTLKK
HACKQEEPIDKKESDPNVVW
KEDYQEQIEILERKNASLTR
KLTLLQNQLNVHKQRITSTP
-------------LSARKIS
SATNQTTSRNSCIEE-----
--------------------
----KSLQNANVIQTLRLQN
TAFEKTIQKLSEQLKER-DE
LIN-----------------
------------QLKQELQF
KEKLHTNDLVELNEQVTSKQ
RVVLQENLDLIRAQRELREK
QLQITN-------------L
EVRIREAESNYEITKSTNHQ
LVNEIERLTRETTQLEQKLF
RLESENNSSSKQQLKILEVI
IA------------------
--------------------
--------------------
--------------------
----
