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Chokepoint data files
Last update: 04/13/2011

ListOfChokePoints_ParaNem - A list of the ECs of the chokepoints found in the ParaNem group

ListOfChokePoints_common_nem - A list of the ECs of the chokepoints found in the CommNem group

ListOfChokePoints_union_nem - A list of the ECs of the chokepoints found in the UniNem group

The following contain the FASTA files for chokepoints in each of the different species we studied:

CommNem
Bma_ECs_genename_chokepoints_CommNem.fasta - Brugia malayi
Cbre_ECs_genename_chokepoints_CommNem.fasta - Caenorhabditis brenneri
Cbri_ECs_genename_chokepoints_CommNem.fasta - Caenorhabditis briggsae
Cel_ECs_genename_chokepoints_CommNem.fasta - Caenorhabditis elegans
Cjap_ECs_genename_chokepoints_CommNem.fasta - Caenorhabditis japonica
Crem_ECs_genename_chokepoints_CommNem.fasta - Caenorhabditis remanei
Mhap_ECs_genename_chokepoints_CommNem.fasta - Meloidogyne hapla
Minc_ECs_genename_chokepoints_CommNem.fasta - Meloidogyne incognita
Ppn_ECs_genename_chokepoints_CommNem.fasta - Pristionchus pacificus
Tsp_ECs_genename_chokepoints_CommNem.fasta - Trichinella spiralis

UniNem
Bma_ECs_genename_chokepoints_UniNem.fasta - Brugia malayi
Cbre_ECs_genename_chokepoints_UniNem.fasta - Caenorhabditis brenneri
Cbri_ECs_genename_chokepoints_UniNem.fasta - Caenorhabditis briggsae
Cel_ECs_genename_chokepoints_UniNem.fasta - Caenorhabditis elegans
Cjap_ECs_genename_chokepoints_UniNem.fasta - Caenorhabditis japonica
Crem_ECs_genename_chokepoints_UniNem.fasta - Caenorhabditis remanei
Mhap_ECs_genename_chokepoints_UniNem.fasta - Meloidogyne hapla
Minc_ECs_genename_chokepoints_UniNem.fasta - Meloidogyne incognita
Ppn_ECs_genename_chokepoints_UniNem.fasta - Pristionchus pacificus
Tsp_ECs_genename_chokepoints_UniNem.fasta - Trichinella spiralis


 
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