Links 
NemaBrowse

Project
Phyla
Data FTP
Accession IDs
Software
Clone Requests
FAQ

NemaGene
Codon Usage Tables
NemaBrowser
Cluster Data FTP
NemaGene FAQ

Function and Expression
GO associations
NemaPath KEGG associations
Intestinal Transcriptome
Nematode Protein Families
Microarray

NemaBrowse
NemaBrowse is a collection of nematode genomes annotated with gene predictions and displayed using the GBrowse interface. Gene names are those assigned by the various gene calling mechanisms employed during gene prediction and may be subject to change. The top homology to NR is obtained using WU-BLAST and applying a post-alignment cutoff on the protein alignment of 35 bits + 55% identity.



Annotated genomes:
(last updated 09-17-08)
Project Species information Gene prediction software GBrowse annotations
Trichuris suis T.suis TaxBrowser at NCBI MAKER Gene list
       

 

Nematode Net v2.0
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 Genome Sequencing Center
 Washington University
 School of Medicine
 4444 Forest Park Blvd.
 St. Louis, MO 63108 USA