Based on the large amount of sequence data that has become available for the first time in many nematodes, we and our collaborators have started to investigate gene expression profiles in various species using RNAseq and microarray technology. This section of Nematode.net hosts the results of various RNAseq and microarray experiments, with the goal of meeting MIAME standards where possible.
NOTE: This page only hosts datafiles for select gene expression experiments. If you are looking for gene expression data based on RNAseq mapping to predicted genes, that data is available for select species within NemaGene. Species labeled in red in the species selection list are annotated with stage/tissue specific FPKM values per gene. If you are looking for putative transcripts based on cDNA assemblies, we have Sanger EST based assembly contigs available for download from our Cluster Data FTP page, and we also have 454 cDNA isotigs available on our cDNA Assemblies page.
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