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[June.7.2017]   
Bioinformatics Workshop for Helminth Genomics (2015) class materials now freely available!

[May.11.2017]   
NTDs get some well deserved coverage outside the usual channels: Financial Times Special Report: Neglected Tropical Diseases





News & Announcements May 2017

General News
2015 Bioinformatics Workshop for Helminth Genomics class materials now available to all!

The course handout for the Bioinformatics Workshop for Helminth Genomics that was held in Sept. 2015 is now freely available to any who are interested. It contains step by step tutorials for commonly used bioinformatics procedures and should prove useful for researchers wanting to explore the computational side of nematology

Bioinformatics Workshop for Helminth Genomics
FT special report on NTDs (2017)

The Financial Times has a special report on Neglected Tropical Diseases thats worth reading if you are a subscriber

Financial Times Special Report: Neglected Tropical Diseases
New Data & Tools
Proteomics data now hosted for 7 species!

Nematode.net is now hosting various proteomics data & publication review for 7 nematode species: Brugia malayi, Cooperia oncophora, Dirofilaria immitis, Nippostrongylus brasiliensis, Oesophagostomum dentatum, Onchocerca volvulus and Strongyloides ratti. The information is hosted within the appropriate species block in our Data downloads page!


Featured Publications

Martin J, Rosa BA, Ozersky P, Hallsworth-Pepin K, Zhang X, Bhonagiri-Palsikar V, Tyagi R, Wang Q, Choi Y, Gao X, McNulty S, Brindley PJ, Mitreva M (2014) Helminth.net: expansions to Nematode.net and an introduction to Trematode.net. Nucleic Acids Research doi: 10.1093/nar/gku1128 [Advanced access] link


Rutter WB, Hewezi T, Abubucker S, Maier TR, Huang G, Mitreva M, Hussey RS, Baum TJ. (2014) Mining novel effector proteins from the esophageal gland cells of meloidogyne incognita. Mol Plant Microbe Interact Sep;27(9):965-74. doi: 10.1094/MPMI-03-14-0076-R. link


Ondrovics M, Silbermayr K, Mitreva M, Young ND, Gasser RB, Joachim A. (2014) Proteomics elucidates key molecules involved in exsheathment in vitro in Oesophagostomum dentatum. Int J Parasitol. Jul 15. pii: S0020-7519(14)00147-7. doi: 10.1016/j.ijpara.2014.06.003. [Epub ahead of print] link


Sotillo J, Sanchez-Flores A, Cantacessi C, Harcus Y, Pickering D, Bouchery T, Camberis M, Tang SC, Giacomin P, Mulvenna J, Mitreva M, Berriman M, LeGros G, Maizels RM, Loukas A. (2014) Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Mol Cell Proteomics Jul 3. pii: mcp.M114.038950. [Epub ahead of print] (link)


Cantacessi C, Giacomin P, Croese J, Zakrzewski M, Sotillo J, McCann L, Nolan MJ, Mitreva M, Krause L, Loukas A. (2014) Impact of Experimental Hookworm Infection on the Human Gut Microbiota. J Infect Dis. May 3. pii: jiu256. [Epub ahead of print] (link)


Abubucker S, McNulty SN, Rosa BA, Mitreva M. (2014) Identification and characterization of alternative splicing in parasitic nematode transcriptomes. (2014) Parasit Vectors. Apr 1;7:151. doi: 10.1186/1756-3305-7-151. (link)


Mangiola S, Young ND, Sternberg PW, Strube C, Korhonen PK, Mitreva M, Scheerlinck JP, Hofmann A, Jex AR, Gasser RB. (2014) Analysis of the transcriptome of adult Dictyocaulus filaria and comparison with Dictyocaulus viviparus, with a focus on molecules involved in host-parasite interactions. Int J Parasitol. Mar;44(3-4):251-61. doi: 10.1016/j.ijpara.2013.12.003. Epub 2014 Jan 31. (link)


Tang YT, Gao X, Rosa BA, Abubucker S, Hallsworth-Pepin K, Martin J, Tyagi R, Heizer E, Zhang X, Bhonagiri-Palsikar V, Minx P, Warren WC, Wang Q, Zhan B, Hotez PJ, Sternberg PW, Dougall A, Gaze ST, Mulvenna J, Sotillo J, Ranganathan S, Rabelo EM, Wilson RK, Felgner PL, Bethony J, Hawdon JM, Gasser RB, Loukas A, Mitreva M. (2014) Genome of the human hookworm Necator americanus. Nat Genet. Mar;46(3):261-9. doi: 10.1038/ng.2875. Epub 2014 Jan 19. (link)


 
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