Species page : Globodera pallida

Registration closed for Bioinformatics Workshop for Helminth Genomics.

Announcing the Bioinformatics Workshop for Helminth Genomics! Being held on the 10th & 11th of September this year. Click the link to find out more!

The paper expansions to and an introduction to is now available online!

[Sept.19.2014] has grown again, click here to learn more!

[Sept.15.2014] is now part of the collection of sites, click here to learn more!

Species Globodera pallida
Common Name: Potato cyst nematode or Golden Nematode
Clade: Clade IVb
Disease: Potato cyst nematodes cause substantial yield losses to potato farmers - particulary in Europe. Quarantine has kept the disease out of the United States in recent decades.
Libraries: Library links
Available cDNAs:
Sanger ESTs:   4338 reads   2973 contigs   nucleotide link   protein link
Sequencing: The Genome Institute at Washington University & Wageningen University, The Netherlands and Scottish Crop Research Institute
External Collaborators: Catherine Lilley ( ) University of Leeds
UK Peter Urwin ( ) University of Leeds, UK
Vivian Blok ( ) Scottish Crop Research Institute, UK
Geert Smant Wageningen University, The Netherlands,
John Jones, Scottish Crop Research Institute,
E. Grenier INRA, France,
Project Contact: Makedonka Mitreva
NemaGene information: NemaGene gene count :16,417
NemaBLAST database: BLAST vs. reads grouped by library
BLAST vs. transcript contigs & genes
Codon usage table: Codon Usage table
NemFam database: NemFam search
GO Associations: GO Associations
KEGG Associations: NemaPath
Nembase4 species page: Globodera pallida species page at Nembase4
Sanger Institute genome resource: Globodera pallida genome resources at the Sanger Institute v4.0           Copyright Statement
  User support forum User Support
The Genome Institute Washington University School of Medicine